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Biochemistry 301 Pr...

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Fundamentals of Bio...

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Fundamentals of Biochemistry. Stryer. Biochemistry. Proteins: Polymers of Amino Acids. 20 different amino acids: many combinations; Proteins are made in the ...

Protein Structure

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http://ep.llnl.gov/...

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http://ep.llnl.gov/msds/Staph-infection/infection.html. Streptococcus pyogenes. 96000 x. Vincent A. Fischetti Ph.D., Rockefeller University

Evolution of Bacter...

Author: Milton Saier

Institution: University of California, San Diego

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PowerPoint Presenta...

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PowerPoint Presentation on Evolution of Bacterial Protein Secretion or PowerPoint Presentation on Protein secretion systems and their structure and evolution

Protein Structure D...

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PSA primary systmat...

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PSA primary systmatic amyloidosis immunoglobulin light chain and fragments. SAA 1 secondary systmatic amyloidosis serum amyloid A 78 residue fragment ...

DNA, RNA, Protein S...

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Jöns Jacob Berzeliu...

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Jöns Jacob Berzelius (1779-1848) who also determined the atomic and molecular weights of thousands of substances, discovered several elements including selenium, first

PPT- Clustalw A Pr...

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PPT- When one amino...

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PPT- When one amino acid substitute another amino acid in a sequence, if two amino acids have similar features, the mutation will less likely disturb the protein structure

PPT- Protein-protei...

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PPT- Protein-protei...

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PPT- Protein-protein interactions: structure and systems approaches to ...

Principles of Prote...

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Consists of two a h...

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Consists of two a helices and a short extended amino acid chain between them. Carboxyl-terminal helix fits into the major groove of DNA. This motif is found in DNA

Protein Structure, ...

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SCOP, ’Structural C...

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SCOP, ’Structural Classification of Proteins’, manual classification; CATH, ’Class Architecture Topology Homology’, based on the SSAP algorithm; FSSP,

PPT- Genetic contro...

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PPT- Genetic materi...

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PPT- Genetic material of living organisms is either DNA or RNA. DNA – Deoxyribonucleic acid; RNA – Ribonucleic acid . Genes are lengths of DNA that code for particular

Protein Structure a...

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Proteins: Structure...

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Proteins: Structure Forming the Protein Chain . Dehydration Synthesis between COOH & NH 2 . Phenylalanine . Leucine

Protein Structure C...

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A systematic compar...

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A systematic comparison of protein structure classifications: SCOP, CATH and FSSP.SCOP and CATH are inconsistent in their domain, class,

Protein Structure, ...

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How Many Folds Are ...

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How Many Folds Are There ? 54. CATH: Protein Structure ClassificationCATH is a novel hierarchical classification of protein domain structures,

Molecular Modeling ...

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Molecular Modeling ...

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Molecular Modeling Methods & Ab Initio Protein Structure Prediction

PPT- Advancing X-ra...

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PPT- Advancing X-ra...

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PPT- Advancing X-ray Crystallography via Protein Structure Prediction

Post Transfusion Pu...

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Foreign antigen ind...

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Foreign antigen induces formation of autoantibodies which recognize the protein structure surrounding the antigen or another epitope on the patient’s

PPT- DNA/Protein st...

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PPT- Duchenne-type:...

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PPT- Duchenne-type: more severe, frameshift-mutations Becker-type: milder phenotype, “in frame”- mutations . Posture changes during progression . of Duchenne muscular dystrophy

Methods of Protein ...

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Methods of Protein ...

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Methods of Protein Structure Alignment

PPT- A Current Topi...

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PPT- Newly synthesi...

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PPT- Newly synthesized “Stress Protein (HSP)” binds to Hydrophobic domainStress Proteins (Heat Shock Proteins, HSPs) protect the Protein Structure and ...

Lecture 2 Protein S...

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ATP is major energy...

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ATP is major energy carrier; energy is released through hydrolysis of g-phosphate . a denosine t ri p hosphate . ADP + P i . ATP . energy input . energy output

Protein Structure a...

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Links from the swis...

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Links from the swissprot entry of human receptor tyrosine-protein kinase ErbB-1

Biology Information...

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Biochemistry: Bioph...

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Biochemistry: Biophysics of Macromolecules (Bi 132), Principles of 3-D Protein Structure (BiCurriculum is versatile: can follow genetics, biochemistry, ...

PPT- protein - de...

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PPT- Definition . T...

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PPT- Definition . Threading - A protein fold recognition technique that involves incrementally replacing the sequence of a known protein structure with a query sequence of unknown ...

PPT- Protein Struct...

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PPT- CATH. Somewhat...

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PPT- CATH. Somewhat objective. SCOP. No objective definition; Tends towards evolutionaryThere exists a protein of similar fold (analogy); DALI (CATH & SCOP)

PPT- Protein Struct...

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PPT- Protein Struct...

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PPT- Protein Structure Prediction

PPT- Protein Struct...

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PPT- Protein Struct...

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PPT- Protein Structure Prediction using ROSETTA

DNA/Protein structu...

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Acetylcholine recep...

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Acetylcholine receptor; Muscles, kinesins and tubulin ; Preserve protein by; Negative stain (envelope only) Freezing in vitreous ice (Cryo-EM, true density maps)

Structure of Src Fa...

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Structure of Src Fa...

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Structure of Src Family Protein Tyrosine Kinase : Lck

Special Topics in C...

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You should feel fre...

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You should feel free to suggest new material/topics. Preliminaries. GradingConstruct an all-atom model of the target sequence from a template structure

Review Protein Sec...

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Review : Protein Se...

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Review : Protein Secondary Structure Prediction Continues to Rise



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